Knowledge Provider (KP) APIs

made for

NCATS Biomedical Data Translator Program

The list of APIs here provide programatic access to the underlying knowledge sources they cover. They were built using BioThings SDK and follow the same design pattern of our official BioThings APIs (MyGene.info, MyVariant.info, MyChem.info, etc). These APIs are serving as the Knowledge Providers (KPs) in the NCATS Biomedical Data Translator project. They were deployed to the NCATS Cloud infrastructure for production use.

We are continuing expanding the list of KP APIs here as new knowledge sources are identified. You are always welcome to suggest a great resource to us as well.

KP APIs

(39) APIs

Name Documents Entity Type
agr 37,994 association
annotator_extra 13,864 node
biggim_drugresponse_kp 1,605,282 association
biomuta 3,737,897 variant
bindingdb 1,438,909 association
biggim 303,581,994 association
bioplanet_pathway_disease 44,084 association
ccle 1,045,196 variant
bioplanet_pathway_gene 74,148 association
cell_ontology 2,755 cell
denovodb 271,069 variant
chebi 200,981 chemical
ddinter 160,235 interaction
clinicaltrials 503,575 trial
dgidb 58,690 association
doid 14,132 disease
disbiome 10,866 association
ebigene2phenotype 2,382 gene
DISEASES 5,760 disease
foodb 992 food
fooddata 6,011 association
fda_drugs 47,977 drug
go_bp 28,927 geneset
geneset 60,363 geneset
gtrx 695 association
hpo 17,272 phenotype
gwascatalog 268,173 variant
hmdbv4 191,367 association
hmdb 191,367 association
go_mf 11,146 geneset
go 43,008 gene
mgigene2phenotype 66,089 gene
go_cc 4,189 geneset
mondo 29,390 disease
idisk 919 umls
kaviar 213,390,302 variant
multiomics_clinicaltrials_kp 207,683 association
innatedb 33,295 gene
mrcoc 46,064,731 cooccurrence